Validating Clustering for Gene Expression
Data
by KY Yeung - 2000 - Cited by 374
http://faculty.washington.edu/kayee/cluster/YeungHaynorRuzzo1.pdf
Validating
Clustering for Gene Expression Data
by KY Yeung - 2000 - Cited by 373
http://faculty.washington.edu/kayee/cluster/cluster.pdf
TECHNIQUES FOR CLUSTERING GENE EXPRESSION DATA
by G Kerr - Cited by 21
http://www.computing.dcu.ie/~mcrane/GKerrGeneCluster_CompBiolMed.pdf
Meta-Clustering of Gene Expression Data and
Literature-based ...
by P Glenisson - Cited by 31
ftp://ftp.esat.kuleuven.ac.be/pub/SISTA/glenisson/reports/iCluster.pdf
Adaptive quality-based clustering of gene
expression profiles
by F De Smet - Cited by 144
ftp://ftp.esat.kuleuven.ac.be/pub/SISTA/desmet/reports/adapquality_rev3.pdf
LNAI 5027
- Clustering of Gene Expression Data with Quantum
...
For validating the new method of clustering, this section compares the results of K- means, PSO and QPSO clustering algorithms on four gene expression data ...
http://www.springerlink.com/index/606415484G18376H.pdf
LNBI 4643
- Validating Gene Clusterings by Selecting
Informative ...
most of these approaches yielded useful analysis of gene expression data, the ... vides a global validation measure of gene clusterings. The method works by ...
http://www.springerlink.com/index/b65k04185744q1l2.pdf
1 Evaluation
and Comparison of Clustering Algorithms in
Analyzing ...
by G Chen - Cited by 50
http://rulai.cshl.edu/reprints/Clust_cmp_SS02.pdf
Clustering, Assessment and
Validation: application expression
data
Clustering, Assessment and Validation: an application to gene expression data. A. Ciaramella, S. Cocozza, F. Iorio, G. Miele, F. Napolitano, M. Pinelli, ...
http://ieeexplore.ieee.org/iel5/4370890/4370891/04371199.pdf?arnumber=4371199
Validating Clustering for Gene Expression
Data Based on Semantic ...
Many clustering algorithms [1-5] have been proposed to analyze gene expression data. The validation of clustering algorithms is a demanding ...
http://ieeexplore.ieee.org/iel5/4534879/4534880/04535052.pdf?arnumber=4535052
Using repeated measurements to validate
hierarchical gene clusters
Validating clustering for gene expression data. Bioinformatics, 17:309–318, 2001. [23]K.Y. Yeung, M. Medvedovic, and R.E. Bumgarner. Clustering gene- ...
http://bioinformatics.oxfordjournals.org/cgi/reprint/btn017v1.pdf
BIOINFORMATICS APPLICATIONS NOTE Vol. 19 no. 18 2003, pages
2494–2495
which integrate clustering and validation methods for pre- dicting the optimal number of clusters in gene expression data analyses. ...
http://bioinformatics.oxfordjournals.org/cgi/reprint/19/18/2494.pdf
Cluster validation techniques for genome
expression data
by N Bolshakova - Cited by 129
http://www.scss.tcd.ie/publications/tech-reports/reports.02/TCD-CS-2002-33.pdf
Machaon CVE: Cluster validation for gene
expression data
by N Bolshakova - 2003 - Cited by 13
http://www.scss.tcd.ie/publications/tech-reports/reports.03/TCD-CS-2003-48.pdf
Meta-Clustering of Gene Expression Data and
Literature-based ...
by P Glenisson - 2003 - Cited by 31
http://www.acm.org/sigs/sigkdd/explorations/issues/5-2-2003-12/m11-glenisson.pdf
A
stability-based algorithm to validate hierarchical
clusters of ...
Datta, S. and Datta, S. (2003) 'Comparison and validation of statistical clustering techniques for microarray gene expression data', Bioinformatics, Vol. ...
http://inderscience.metapress.com/index/J6Q06L01N8643437.pdf
Cluster
Analysis and its Applications to Gene Expression
Data
by R Sharan - 2002 - Cited by 37
http://www.math.tau.ac.il/~roded/schering.pdf
Double Self-Organizing Maps to Cluster Gene Expression
Data
by D Wang - Cited by 16
http://www.dice.ucl.ac.be/Proceedings/esann/esannpdf/es2002-403.pdf
DNA
Microarray Data Clustering Based on Temporal
Variation: FCV ...
by CS Möller-Levet - Cited by 9
http://www.sbi.uni-rostock.de/dokumente/p_tsd_appl_bioinf.pdf
Clustering Gene Expression Data
Clustering Gene Expression Data. (Slides thanks to Dr. Mark Craven) ..... relative validation. • How does it compare to other clusterings using these ...
http://pages.cs.wisc.edu/~molla/summer_research_program/lecture3.pdf
MetaClustering:
Discovery of The Di erent Sample Clusterings in
...
by D Venet - 2006 - Related articles
http://www.jsbi.org/journal/GIW06/GIW06F017.pdf
Validation
of Mathematical Model Based Clustering by Using
Time ...
by K Hakamada - Related articles
http://www.jsbi.org/journal/GIW05/GIW05P041.pdf
Tumor Classification by Gene Expression Profiling:
Comparison and ...
by M Granzow - Cited by 24
http://www.infj.ulst.ac.uk/~cbbg23/papers/acmsigbio2001.pdf
Comparative
Study of Clustering Techniques for Gene
Expression ...
by S Leach - Cited by 3
http://recomb2000.ims.u-tokyo.ac.jp/Posters/pdf/1.pdf
Microarray Gene Expression Data Mining:
Clustering Analysis Review
by E Naghieh - Related articles
http://www.montefiore.ulg.ac.be/~kvansteen/GBIO0009-1/ac20082009/Naghieh_clustering review in MA.pdf
A consensus framework for exploring microarray
data using multiple ...
by T Laderas - Cited by 8
http://www.ohsucancer.com/isrdev/Consense/download/Laderasetal_OMICS.pdf
Validating
Gene Clusterings by Selecting Informative
Gene Ontology ...
by IG Costa - Related articles
http://www.cin.ufpe.br/~igcf/preprint/Costa2007a.pdf
Semi-Supervised
Clustering of Yeast Gene Expression
Data
by A Schönhuth - Cited by 3
http://www.cin.ufpe.br/~igcf/preprint/Schoenhut2006.pdf
An
algorithm to assess the reliability of hierarchical
clusters in ...
[1] Datta, S., Datta, S.: Comparison and validation of statistical clustering techniques for microarray gene expression data. Bioinformatics 19 (2003) 459– ...
http://homes.dsi.unimi.it/~valenti/papers/avo-vale-KES2008.pdf
Clustering Labeled Data and
Cross-Validation for Classification ...
by M Trochesset - Cited by 1
http://www.cs.rpi.edu/~zaki/Workshops/BIOKDD04/proceedings/7-trochesset.pdf
Comparative
analysis of clustering methods for gene
expression ...
by IG Costa - 2004 - Cited by 16
http://www.scielo.br/pdf/ /gmb/v27n4/22434.pdf
Consensus
clustering and functional interpretation of
gene ...
by S Swift - 2004 - Cited by 45
http://people.brunel.ac.uk/~cssrajt/Papers/GBConsensus.pdf
Fuzzy Clusterings of Gene Expression Data
by ME Futschik - Cited by 26
http://itb.biologie.hu-berlin.de/~futschik/publis/futschik_ieee.pdf
Bayesian
Validation of Fuzzy Clustering
for Analysis of Yeast Cell ...
by KJ Kim - 2005 - Related articles
http://sclab.yonsei.ac.kr/publications/Papers/LNCS/kes2005-2.pdf
Analyzing fuzzy partitions of saccharomyces cerevisiae cell-cycle
...
by SH Yoo - 2004 - Cited by 2
http://sclab.yonsei.ac.kr/publications/Papers/IC/Analyzing fuzzy partitions of Saccharomyces cerevisiae cell-cycle gene expression data by Bayesian validation method.pdf
Class Prediction and Discovery Using Gene Expression
Data
by DK Slonim - 2000 - Cited by 173
https://www.broadinstitute.org/mpr/publications/projects/Leukemia/Slonim_et_al_2000.pdf
Stability-Based
Model Order Selection in Clustering with ...
by V Roth - Cited by 9
http://www.ml.inf.ethz.ch/publications/roth.icann02.pdf
Ensemble
clustering method based on the resampling
similarity ...
14 Aug 2007 ... 9 Datta S, Datta S. Comparisons and validation of statistical clustering techniques for microarray gene expression data. ...
http://smm.sagepub.com/cgi/rapidpdf/0962280206071842v1.pdf
Detecting
Stable Clusters Using Principal Component
Analysis
by A Ben-Hur - Cited by 41
http://www.cs.colostate.edu/~asa/papers/pcachap.pdf
Modeling and Visualizing Uncertainty in Gene Expression
Clusters ...
[19] K. Yeung, D. Haynor, and W. Ruzzo, “Validating clustering for gene expression data,” Bioinformatics, vol. 17, pp. 309–318, ...
http://www.kyb.mpg.de/publications/attachments/IEEE-ACM-Trans-Comp-Biol-Bioinf-Rasmussen_4799[0].pdf
Cluster Analysis for Gene Expression Data: A
Survey
by D Jiang - Cited by 285
http://www.cse.buffalo.edu/DBGROUP/bioinformatics/papers/survey.pdf
::: Normalization methods and data preprocessing
Course on ...
8 Oct 2008 ... K-means clustering. 1. 2. 3. 4. 5. 6. Gene expression ... 2007). ::: Clustering validation. Clustering Analysis. Clustering Analysis ...
http://bioinfo.cnio.es/files/training/Microarray_Course/5_UBio_Clustering_Theory.pdf
A Comparison of Clustering Algorithms for Use in
Large Scale Gene ...
by CE Hart - Related articles
http://trs-new.jpl.nasa.gov/dspace/bitstream/2014/15995/1/00-1836.pdf
A novel OPTOC-based clustering algorithm for
gene expression data ...
by AWC Liew - 2003 - Cited by 1
http://www98.griffith.edu.au/dspace/bitstream/10072/24441/1/43500_1.pdf
How does
gene expression clustering work?
- Related articles
http://gene-quantification.com/haeseleer-bioinf-2005.pdf
Associative
Clustering Janne Sinkkonen1, Janne Nikkilia1, Leo
...
by J Sinkkonen - Cited by 6
http://www.cis.hut.fi/projects/mi/papers/ecml04.pdf
Clustering Gene Expression Data Using Adaptive
Double Self ...
in gene expression data is unknown, the validation of SOM's clustering result becomes a critical issue. One may heuristically validate the clustering ...
http://physiolgenomics.physiology.org/cgi/reprint/00138.2002v1.pdf
Clustering of gene expression profiles: creating
initialization ...
23 Mar 2010 ... one according to chosen validation measure. ... unstable data points reduce dependency of resulting clusterings on initial centers? ..... et al., Periodic gene expression program of the fission yeast cell ...
http://www.rothamsted.bbsrc.ac.uk/bab/conf/ib2010/presentations/presentation_134.pdf
USING GRAPHICAL
MODELS AND GENOMIC EXPRESSION DATA TO ...
by AJ Hartemink - 2001 - Cited by 299
http://www.psrg.csail.mit.edu/pubs/psbcamera.pdf
Multi-SOM: A novel clustering algorithm for
gene expression data ...
Statistical validation : Based on the gene expression levels ... Clustering by Multi-SOM. Statistical validation: PCA. Microarray data ...
http://www.lirmm.fr/france_afrique/Nairobi2007/presentations/Amel_Ghouila.pdf
1 2
